Some flu strains can make mice forgetful

With fevers, chills and aches, the flu can pound the body. Some influenza viruses may hammer the brain, too. Months after being infected with influenza, mice had signs of brain damage and memory trouble, researchers report online February 26 in the Journal of Neuroscience.

It’s unclear if people’s memories are affected in the same way as those of mice. But the new research adds to evidence suggesting that some body-wracking infections could also harm the human brain, says epidemiologist and neurologist Mitchell Elkind of Columbia University, who was not involved in the study.
Obvious to anyone who has been waylaid by the flu, brainpower can suffer at the infection’s peak. But not much is known about any potential lingering effects on thinking or memory. “It hasn’t occurred to people that it might be something to test,” says neurobiologist Martin Korte of Technische Universität Braunschweig in Germany.

The new study examined the effects of three types of influenza A — H1N1, the strain behind 2009’s swine flu outbreak; H7N7, a dangerous strain that only rarely infects people; and H3N2, the strain behind much of the 2017–2018 flu season misery (SN: 2/17/18, p. 12). Korte and colleagues shot these viruses into mice’s noses, and then looked for memory problems 30, 60 and 120 days later.

A month after infection, the mice all appeared to have recovered and gained back weight. But those that had received H3N2 and H7N7 had trouble remembering the location of a hidden platform in a pool of water, the researchers found. Mice that received no influenza or the milder H1N1 virus performed normally at the task.
Researchers also studied the brain tissue of the infected mice under a microscope and found that the memory problems tracked with changes in nerve cells. A month after H7N7 or H3N2 infection, mice had fewer nerve cell connectors called dendritic spines on cells in the hippocampus, a brain region involved in memory. Electrical experiments on the nerve cell samples in dishes also suggested the cells’ signal-sending abilities were impaired.
What’s more, these mice’s brains looked inflamed under the microscope, full of immune cells called microglia that were still revved up 30 and 60 days after infection. Cell counts revealed that mice that had suffered through H3N2 or H7N7 had more active microglia than mice infected with H1N1 or no virus at all. That lingering activity was surprising, Korte says; most immune cells in the body usually settle down soon after an infection clears.

These memory problems and signs of brain trouble were gone by 120 days, which translates to about a decade in human time, Korte says. “I’m not saying that everyone who has influenza is cognitively impaired for 10 years,” he says, noting that human brains are much more complex than those of mice. “The news is more that we should not only look at lung functionality after the flu, but also cognitive effects, weeks and months after infection.”

H7N7 can infect brain cells directly. But H1N1 and H3N2 don’t typically get into the brain (and Korte and colleagues confirmed that in their experiments). Some flu viruses may be causing brain trouble remotely, perhaps through inflammatory signals in the blood making their way into the brain, the study suggests. If that pathway is confirmed, then many types of infections could cause similar effects on the brain. “It is plausible that this is a general phenomenon,” Elkind says.

Kid-friendly e-cigarette ads appear to work

In the United States, cartoon characters are a no-no in cigarette ads, and candy- or fruit-flavored cigarettes can’t be sold. But that’s not the case for e-cigarettes, and these youth-appealing tactics are luring teens who have never used tobacco products to give e-cigs and even cigarettes a try, a new study suggests.

Researchers analyzed surveys of nearly 7,000 kids ages 12 to 17 who had never used a tobacco product as of 2013 to 2014. Teens who recalled seeing or liking e-cigarette ads were 1.6 times as likely to be open to trying e-cigs or to actually try them the next year as kids who didn’t remember the ads, researchers report online March 26 in JAMA Pediatrics. E-cig ads often feature celebrities, cartoons (one product shows a unicorn vomiting a rainbow) or references to sweet flavors, such as Skittles.
Past research has shown a link between traditional cigarette advertisements and receptive nonsmoking adolescents going on to light up. Nearly nine out of 10 smokers tried their first cigarette by age 18. Gearing traditional cigarette ads toward teens has been restricted since 1998.

In 2016, more than 2.1 million U.S. middle and high school students reported using e-cigarettes. That same year, an estimated 20.5 million — or four in five — were exposed to e-cigarette ads.

But e-cigarette ads are doing more than hyping vaping, the study suggests. The ads also appeared to nudge some teens and young adults to take up cigarette smoking. Of a larger group of about 10,500 kids ages 12 to 21 who had never used tobacco products, 18 percent recalled seeing or liking e-cigarette ads but not cigarette ads. Five percent of those teens had started to smoke by the next year.

Extrapolating to the U.S. population, “105,000 12- to 21- year olds appear to have smoked their first cigarette because of the influence of e-cigarette advertising,” says John Pierce, a behavioral epidemiologist at the University of California, San Diego.
Previous research has found that teens who use e-cigarettes are more likely to smoke traditional cigarettes (SN: 9/19/15, p. 14). The fact that e-cigarette ads may up the risk of smoking “raises an unprecedented concern for adolescent tobacco control,” addiction psychologist Adam Leventhal and epidemiologist Jessica L. Barrington-Trimis, both of the University of Southern California’s Keck School of Medicine in Los Angeles, write in an accompanying editorial in the journal.

In an interview, Leventhal adds that restricting such advertising is an important target for public health campaigns and policies to limit youth use of tobacco products.

Birds get their internal compass from this newly ID’d eye protein

Birds can sense Earth’s magnetic field, and this uncanny ability may help them fly home from unfamiliar places or navigate migrations that span tens of thousands of kilometers.

For decades, researchers thought iron-rich cells in birds’ beaks acted as microscopic compasses (SN: 5/19/12, p. 8). But in recent years, scientists have found increasing evidence that certain proteins in birds’ eyes might be what allows them to see magnetic fields (SN: 10/28/09, p. 12).

Scientists have now pinpointed a possible protein behind this “sixth sense.” Two new studies — one examining zebra finches published March 28 in Journal of the Royal Society Interface, the other looking at European robins published January 22 in Current Biology — both single out Cry4, a light-sensitive protein found in the retina. If the researchers are correct, this would be the first time a specific molecule responsible for the detection of magnetic fields has been identified in animals.
“This is an exciting advance — we need more papers like these,” says Peter Hore, a chemist at the University of Oxford who has studied chemical reactions involved in bird navigation.

Cry4 is part of a class of proteins called cryptochromes, which are known to be involved in circadian rhythms, or biological sleep cycles (SN: 10/02/17, p. 6). But at least some of these proteins are also thought to react to Earth’s magnetic field thanks to the weirdness of quantum mechanics (SN: 7/23/16, p. 8). The protein’s quantum interactions could help birds sense this field, says Atticus Pinzon-Rodriguez, a biologist at the University of Lund in Sweden who was involved with the zebra finch study.

To figure out which of three cryptochromes is responsible for this quantum compass, Pinzon-Rodriguez and his colleagues examined the retinas, muscles and brains of 39 zebra finches for the presence of the three proteins Cry1, Cry2 and Cry4.
The team found that while levels of Cry1 and Cry2 followed a rhythmic pattern that rose and fell over the day, Cry4 levels remained constant, indicating the protein was being produced steadily.

“We assume that birds use magnetic compasses any time of day or night,” says Lund biologist Rachel Muheim, a coauthor on the zebra finch study.

European robins also showed constant levels of Cry4 during a 24-hour cycle, and higher levels during their migratory season. And the researchers in that study found Cry4 in an area of the robin’s retina that receives a lot of light — a position that would help it work as a compass, the study says.

“We have quite a lot of evidence, but [Cry4] is not proven,” says Henrik Mouritsen, an animal navigation expert at the Institute of Biology and Environmental Sciences in Oldenburg, Germany, who participated in the robin study. More definitive evidence might come from observing birds without a functioning Cry4 protein, to see if they still seem to have an internal compass.

Even then, Hore says, we still may not understand how birds actually perceive magnetic fields. To know, you’d have to be a bird.

Why touch can be such a creepy sensation in VR

There’s a fine line between immersive and unnerving when it comes to touch sensation in virtual reality.

More realistic tactile feedback in VR can ruin a user’s feeling of immersion, researchers report online April 18 in Science Robotics. The finding suggests that the “uncanny valley” — a term that describes how humanoid robots that look almost but not quite human are creepier than their more cartoonish counterparts — also applies to virtual touch (SN Online: 11/22/13).
Experiment participants wearing VR headsets and gripping a controller in each hand embodied a virtual avatar holding the two ends of a stick. At first, users felt no touch sensation. Then, the hand controllers gave equally strong vibrations every half-second. Finally, the vibrations were finely tuned to create the illusion that the virtual stick was being touched in different spots. For instance, stronger vibrations in the right controller gave the impression that the stick was nudged on that side.

Compared with scenarios in which users received either no touch or even buzzing sensations, participants reported feeling far less immersed in the virtual environment when they received the realistic, localized touch. This result demonstrates the existence of a tactile uncanny valley, says study coauthor Mar Gonzalez-Franco, a human-computer interaction researcher at Microsoft Research in Redmond, Washington.

But when users were shown a marble touching the virtual stick wherever they felt the localized touch, the participants found this realistic tactile feedback highly immersive rather than bothersome. The finding indicates that rich tactile feedback in VR may need to be paired with other sensory cues that explain the source of the sensation to avoid spooking users, Gonzalez-Franco says.

Better understanding how realistic touch sensations can break the VR illusion may help developers create more engaging virtual environments for games and virtual reality therapy, says Sean Follmer, a human-computer interaction researcher at Stanford University not involved in the study.

This meteorite’s diamonds hint that it was born in a lost planet

A chunk of space rock may have been forged inside a long-lost planet from the early solar system. Tiny pockets of iron and sulfur embedded in diamonds inside the meteorite probably formed under high pressures found only inside planets the size of Mercury or Mars, researchers suggest April 17 in Nature Communications.

The parent planet no longer exists, though — it was smashed to smithereens in the solar system’s violent infancy.

“We probably have in our hands a piece of one of these first planets that have disappeared,” says Philippe Gillet of École Polytechnique Fédérale de Lausanne, or EPFL, in Switzerland.
EPFL physicist Farhang Nabiei, Gillet and their colleagues analyzed minuscule fragments of the Almahata Sitta meteorites. These meteorites are famous for coming from the first-ever asteroid tracked from orbit to ground as it streaked to the Nubian desert in Sudan in 2008 (SN: 4/25/09, p. 13).
The meteorites belong to a class called ureilites, which have compositions different from those in any of the known stony planets in the solar system. These ureilites contain 100-micrometer diamonds — too large to have been formed in the shock of two asteroids colliding. Such diamonds could form, however, inside asteroids that are at least 1,000 kilometers in diameter, where pressures would be high enough to compress carbon.
But the researchers discovered an oddity that made them question whether the gems came from an asteroid at all: The diamonds had grown around even smaller crystals of iron and sulfur, which normally would repel each other like oil and water, says EPFL physicist Cécile Hébert.

Those crystals would be stable only at pressures above 20 gigapascals, almost 200,000 times atmospheric pressure at sea level on Earth. “That can only be at the center of a very large planet” the size of Mercury, about 4,900 kilometers wide, or in the core-mantle boundary of a planet as large as Mars, about 6,800 kilometers wide, Hébert says.

Such planets probably roamed the early solar system some 4 billion years ago. But only a few survived to become the four rocky planets that exist today. Simulations of the early solar system suggest most of these early planets crashed into each other and broke apart in the first 100 million years.

“We are confirming the existence of such former planets,” Gillet says.

Those planets’ existence alone isn’t surprising, says cosmochemist Meenakshi Wadhwa of Arizona State University in Tempe. “This is the first time, though, that there is direct meteoritic evidence for the existence of a large protoplanetary body in the early solar system that is no longer in existence,” she says.
Not so fast, says cosmochemist Martin Bizzarro of the Natural History Museum of Denmark in Copenhagen. The protoplanet explanation isn’t the only one possible.

“They’ve done very careful work,” he says, but more needs to be done. Testing for remnant magnetic fields could reveal if the meteorites were once within a large planet’s molten core, for instance. Whether the meteorites came from a protoplanet is “still an open question.”

A DIY take on the early universe may reveal cosmic secrets

A DIY universe mimics the physics of the infant cosmos, a team of physicists reports. The researchers hope to use their homemade cosmic analog to help explain the first instants of the universe’s 13.8-billion-year life.

For their stand-in, the scientists created a Bose-Einstein condensate — a state of matter in which atoms are chilled until they all take on the same quantum state. Shaped into a tiny, rapidly expanding ring, the condensate grew from about 23 micrometers in diameter to about four times that size in just 15 milliseconds. The behavior of that widening condensate re-created some of the physics of inflation, a brief period just after the Big Bang during which the universe rapidly ballooned in size (SN Online: 12/11/13) before settling into a more moderate expansion rate.
In physics, seemingly unrelated systems can have similarities under the hood. Scientists have previously used Bose-Einstein condensates to simulate other mysteries of the cosmos, such as black holes (SN: 11/15/14, p. 14). And the comparison between Bose-Einstein condensates and inflation is particularly apt: A hypothetical substance called the inflaton field is thought to drive the universe’s extreme expansion, and particles associated with that field, known as inflatons, all take on the same quantum state, just as atoms do in the condensate.

Scientists still don’t fully understand how inflation progressed, “so it’s hard to know how close our system is to what really happened,” says experimental physicist Gretchen Campbell of the Joint Quantum Institute in College Park, Md. “But the hope is that our system can be a good test-bed” for studying various theories. Already, the scientists have spotted several effects in their system similar to those predicted in the baby cosmos, the team reports April 19 in Physical Review X.

As the scientists expanded the ring, sound waves that were traveling through the condensate increased in wavelength. That change was similar to the way in which light became redshifted — stretched to longer wavelengths and redder colors — as the universe enlarged.
Likewise, Campbell and colleagues saw a phenomenon akin to what’s known as Hubble friction, which shows up as a decrease in the density of particles in the early universe. In the experiment, this effect appeared in the guise of a weakening in the strength of the sound waves in the condensate.
And inflation’s finale, an effect known as preheating that occurs at the end of the rapid expansion period, also had a look-alike in the simulated universe. In the cosmic picture, preheating occurs when inflatons transform into other types of particles. In the condensate, this showed up as sound waves converting from one type into another: waves that had been sloshing inward and outward broke up into waves going around the ring.

However, the condensate wasn’t a perfect analog of the real universe: In particular, while our universe has three spatial dimensions, the expanding ring didn’t. Additionally, in the real universe, inflation proceeds on its own, but in this experiment, the researchers forced the ring to expand. Likewise, there were subtle differences between each of the effects observed and their cosmic counterparts.

Despite the differences, the analog universe could be useful, says theoretical cosmologist Mustafa Amin of Rice University in Houston. “Who knows?” he says. “New phenomena might happen there that we haven’t thought about in the early universe.”

Sometimes, when research crosses over between very different systems — such as Bose-Einstein condensates and the early universe — “sparks can fly,” Amin says.

This self-driving car could one day take you on a real road trip

A new kind of navigation system could help self-driving cars take the road less traveled.

Most autonomous vehicles test-driving in cities navigate using 3-D maps marking every curbside and off-ramp with almost centimeter-level precision (SN Online: 11/21/17). But there are millions of miles of open road that tech companies aren’t likely to plot in such detail any time soon.

Researchers now have developed a new autonomous navigation system that guides vehicles without such high-res maps, according to research being presented May 22 at the IEEE International Conference on Robotics and Automation in Brisbane, Australia. Cars equipped with this tech could hit the road for excursions off the beaten path.
The navigation system charts a course down unfamiliar roads much like a human driver would — by continually scanning its surroundings, albeit with a laser sensor, to gauge how close it is to the edges of the road. Meanwhile, the car also follows a tool akin to a smartphone map app that provides GPS directions to its destination, as well as information about the rules of the road — like speed limits and the positions of stoplights — along the car’s journey.

This system assumes that a car has a clear path down the road, but it could be paired with other existing algorithms that use laser sensing to detect in-road obstacles, like other vehicles or pedestrians, to navigate more heavily trafficked roadways, says study coauthor Teddy Ort, a roboticist at MIT.

Ort and colleagues test-drove a car equipped with this navigation system on a one-lane road winding through a forest in Devens, Mass. The vehicle slowly cruised along a one-kilometer stretch without requiring any human intervention to keep it on the right track. The researchers plan to build a version of this system that can spot lane markings painted on streets, so that the car can drive on more than one-way roads, Ort says.
The technology may be useful for future self-driving cars on cross-country road trips, though such vehicles would probably still use meticulous 3-D maps to weave through city traffic, says Raghvendra Cowlagi, an aerospace engineer at Worcester Polytechnic Institute in Massachusetts who wasn’t involved in the work.

Self-driving cars with this navigation system may also need other kinds of sensors to work in different conditions, says Alexander Wyglinski, an electrical and computer engineer also at Worcester Polytechnic Institute not involved in the study. Since laser sensors don’t work well in rain or snow, for example, these cars might need additional imaging technologies to drive safely in inclement weather (SN: 12/24/16, p. 34).

Here’s how to use DNA to find elusive sharks

Pulling DNA out of bottles of seawater collected from reefs has revealed some of what biologists are calling the “dark diversity” of sharks.

Physicists have their dark matter, known from indirect evidence since humans can’t see it. Dark diversity for biologists means species they don’t see in some reef, forest or other habitat, though predictions or older records say the creatures could live there.

That diversity showed up in a recent comparison of shark sampling methods in reefs in the New Caledonian archipelago, east of Australia. An international team analyzed results from three approaches: sending divers out to count species, baiting cameras and analyzing traces of DNA the animals left in the environment.
Environmental DNA revealed at least 13 shark species — at least six of which failed to show up in the other surveys, the team reports May 2 in Science Advances. With environmental DNA, “you reach the inaccessible,” says marine biologist Jeremy Kiszka of Florida International University in Miami.

The six bonus species found only by DNA included a great hammerhead that might have just been passing through. But the bull shark, silky shark and three other kinds were all plausible as reef residents.

Environmental DNA complements rather than replaces other sampling methods, Kiszka says. The DNA method takes less collecting effort, in this case just 22 bottles of seawater.
Yet these genetic traces give no information about the number of individuals in an area. What’s more, the DNA failed to register three species — tiger, tawny nurse and scalloped hammerhead — that turned up in the other surveys. Even combining all the methods yielded only 16 kinds of sharks. Reports show that 26 shark species once lived in the shallow waters of the archipelago, so 10 remain in the shadows, either having vanished or escaped detection.

Ancient Chinese farmers sowed literal seeds of change in Southeast Asia

People who moved out of southern China cultivated big changes across ancient Southeast Asia, a new analysis of ancient human DNA finds.

Chinese rice and millet farmers spread south into a region stretching from Vietnam to Myanmar. There, they mated with local hunter-gatherers in two main pulses, first around 4,000 years ago, and again two millennia later, says a team led by Harvard Medical School geneticist Mark Lipson. Those population movements brought agriculture to the region and triggered the spread of Austroasiatic languages that are still spoken in parts of South and Southeast Asia, the scientists conclude online May 17 in Science.
Over the past 20 years, accumulating archaeological evidence has pointed to the emergence of rice farming in Southeast Asia between 4,500 and 4,000 years ago, accompanied by tools and pottery showing links to southern China. Austroasiatic languages now found from Vietnam to India contain words for rice and agriculture, suggesting that ancient arrivals from southern China spoke an Austroasiatic tongue. Questions have remained, though, about where Austroasiatic languages originated and whether knowledge about farming practices, rather than farmers themselves, spread from China into Southeast Asia.

Now, DNA from ancient Southeast Asians provides “clinching evidence” for the spread of farming via southern Chinese groups, says archaeologist Charles Higham of the University of Otago in Dunedin, New Zealand, who did not participate in the study. The new report aligns with other ancient DNA evidence of culture-changing population movements across parts of Asia starting around 5,000 years ago (SN: 11/25/17, p. 16). “Ancient human DNA is showing that prehistoric people were far more mobile and exploratory than has often been thought,” Higham says.

Lipson’s team obtained DNA from 18 human skeletons unearthed at five Southeast Asian sites dating to between around 4,100 and 1,700 years ago. These sites are located in Vietnam, Myanmar, Thailand and Cambodia.

DNA preserves poorly in such hot, humid regions. A group led by study coauthor Ron Pinhasi, an archaeologist at the University of Vienna, recently found that human DNA survives best in a skull bone surrounding inner-ear structures that has especially dense tissue. In the new study, DNA was extracted from that bone for each ancient individual.
Roughly 4,000-year-old farmers at Vietnam’s Man Bac site displayed a close genetic relationship to present-day speakers of Austroasiatic languages, especially in southern China, Lipson’s group says. About 25 to 30 percent of the Man Bac farmers’ ancestry came from hunter-gatherers, the scientists estimate, perhaps due to interbreeding of rice growers and foragers in southern China before any migrations occurred. Many populations today that speak Austroasiatic languages also display a similar genetic signature. Genetic signs of additional hunter-gatherer ancestry, probably acquired in Southeast Asia, appeared in two of eight Man Bac farmers.

At approximately 2,000-year-old sites in Vietnam and Myanmar, farmers inherited a genetic makeup that differed in some ways from that of the earlier Man Bac crowd, but still closely resembled the DNA of present-day inhabitants of southern China. A second southern Chinese migration into Southeast Asia likely led to those DNA tweaks, the researchers say.

Ancient DNA research in Asia is in the early stages, Pinhasi emphasizes. Further research will likely reveal more human population movements and genetic exchanges among various groups across Asia (SN Online: 11/10/17), he predicts.

Keeping global warming to 1.5 degrees C helps most species hold their ground

Limiting global warming this century to just 1.5 degrees Celsius above preindustrial temperatures would be a boon to the planet’s biodiversity. This lower warming threshold, compared with warming of 2 degrees C, will preserve much larger swaths of the geographic ranges of tens of thousands of land-based species of plants, vertebrates and insects living on the planet, a new study suggests.

Using a combination of climate simulations and data on the distribution of more than 115,000 terrestrial species worldwide, scientists saw distinct differences in future biodiversity depending on how much warming the planet experiences. At 2 degrees C of warming by 2100, 18 percent of insect species, 16 percent of plant species and 8 percent of vertebrate species saw their geographic ranges shrink by more than half. Under 1.5 degrees C of warming, those numbers fell to 6 percent of insects, 8 percent of plants and 4 percent of vertebrates, the team reports in the May 18 Science.
“Losing half the range is a pretty big impact, because that means [the organisms] stop contributing as much to the ecosystem,” says study coauthor Rachel Warren, an environmental scientist at the University of East Anglia in Britain. These ecosystem contributions include air and water purification, plant pollination and nutrient cycling.

Until a few years ago, 2 degrees was the magic number. If the planet’s nations could limit global warming to just 2 degrees C , scientists thought, the world would be relatively “safe” — with little change to sea levels, species habitats or climate conditions. But over time, concerns began to arise that that target would still incur too great a cost, Warren says.

Many small island nations and less-developed countries, which are likely to be hit hardest by the effects of climate change, have lobbied for a more stringent reduction in greenhouse gas emissions to hold global warming to just 1.5 degrees C by 2100. The Paris Agreement on climate change reached in 2015 reflected that concern, as delegates agreed to limit warming to “well below” 2 degrees C (SN: 1/9/16, p. 6).

But the scientific literature contained little information about the effects of a lower warming target, Warren says. “The scientific community has really been playing catch-up since the agreement.” As part of the Paris agreement, the United Nations’ Intergovernmental Panel on Climate Change is expected in late 2018 to finalize a special report on the impacts of 1.5 degrees C of warming.
For their study, Warren and her colleagues used species distributions from the international Global Biodiversity Information Facility database. The inclusion of insects — a first for such a study, Warren says — is particularly important because they are at the base of many food chains and because of their contributions to ecosystems, including cycling nutrients in soils and pollinating plants.

Based on the current geographic range of each species, the team determined statistically what climatic niche each species preferred. Then the researchers projected how climatic conditions would change globally under three warming scenarios: 1.5 degrees, 2 degrees and 3.2 degrees C, which represents the amount of warming expected by 2100 under nations’ current pledges to limit greenhouse gas emissions. The final step was to track the movement of those niches around the globe in response to climate change, and measure by how much they grew or shrank.
Overall, as the warmer the planet got, most species’ ranges got smaller. That’s for three basic reasons, Warren says. Some climatic niches migrated right into the sea and vanished. Others crept up mountain slopes until they could go no higher. And for some species — such as many plants — the pace of climate change was too rapid for the species themselves to migrate.

So, how much of an improvement is the lower warming target? “It’s very much the right question to be asking,” says Lauren Buckley, an ecologist from the University of Washington in Seattle.

The study “is a great first approximation of the difference in these warming scenarios,” Buckley says. However, she notes, the work’s broad-brush approach means it can’t take into account the physiology of these species or how each might respond to changing climates.

“Some organisms will be winners and some losers with climate change,” she says. “Hopefully, a lot of biologists will start to ask this question, too.”